Video on my research on trees and forests

This time, not on COVID-19, but on my other topic of interest.

I am talking about my love of trees and my research on forests, as part of the UKRI (UK research agency) showcase for COP26.

In this video, I am not addressing controversial aspects of climate change and its causes. But I love trees and I hope that my research will help to protect them and to let people enjoy them.

COVID-19 lessons from Scotland

Edinburgh / Scotland – March 23 2020: Edinburgh’s much loved Greyfriars Bobby statue protected with face mask during the COVD-19 pandemic

I have recently been looking at the age-structured COVID-19 data from Scotland, particularly analysing the latest wave. I think the last couple of months – and especially the last week or so – teach us a lot about the virus spread in highly vaccinated populations.

The size of the outbreak in school-age children is staggering. Possibly there was some under-reporting back in the first or second wave in these age groups, but the latest outbreak is definitely fueled by cases among young people, with some spill-over to the parent – and grant-parent – generation. Compare the peaks this September with the first and the second wave in the graph below:

The proportion of cases and deaths in different age categories in Scotland: black/blue: cases; red: deaths. Points: raw data, lines: 7 days average

At the same time, vaccines are clearly working – the death rate, particularly in 60+ age classes, is much smaller relative to what we did see in the pre-vaccination time. Again, compare the red points in the graph above, in the first and the second wave versus the current, third, wave – a similar number of cases resulting in much fewer deaths.

This is clearly the result of a fantastic roll-out of vaccines, in all – except the youngest – age groups, as shown below:

The proportion of people in age classes with one or more vaccine doses (blue line) and two vaccine doses (red line).

Two things are concerning. The delay in vaccinating young people – and the lack of proper control measures in schools like masks and ventilation – clearly allowed a massive epidemic in these age groups. The deaths were only very few, which is why this epidemic is not getting enough attention in the media, but the consequences in terms of long term complications – “long COVID” – might be massive. In addition, the vaccination progress in the youngest groups is slowing down and reaching a plateau at 70-80% – way too low to make an impact!

Secondly, as seen below, the rapid decline in cases which we saw in the last couple of weeks is slowing down. The virus seems to be bouncing back as the cases actually go up in some age classes (particularly older). This could be because the immunity is waning and we see more breakout cases, but more likely this is a reaction of the epidemic to relaxation of the rules.

The proportion of cases and deaths in different age categories in Scotland: black/blue: cases; red: deaths. Points: raw data, lines: 7 days average

The graph below captures this recent change using the 7-days ratio between cases (a rough estimate of the reproductive number). The value below 1 means the case numbers are declining, and the value above 1 means the case numbers are accelerating.

The ratio of cases delayed by a week for different ages. Points: data, line: 7 weeks running average. The horizontal line at 1. The vertical line at 16th August when schools started.

Report on the UK early 2020 COVID-19 response

Chester, UK: Jun 14, 2020: A general street scene of Chester City centre showing some traffic & pedestrian restrictions which have been put in place to allow social distancing due to Covid-19 pandemic

The results of the UK parliamentary inquiry into the March 2020 response to the pandemic are out this morning. It will take a while to read, analyse, and properly respond to the analysis, but I want to make one quick point.

Although there were clearly mistakes made in early 2020 and I did not at the time agree with what Her Majesty Government was doing, I can give them the benefit of doubt for this part of the pandemic. It was clearly making decisions in face of extreme uncertainty, whereby not only the model outputs were fuzzy, but the parameters or even critical assumptions were not clear.

We definitely should have protected the care homes more and block the travel better, but I can – perhaps only just – understand the decision to delay the lockdowns and – perhaps even more reluctantly – accept the arguments for “flattening the second curve”.

Instead, I consider the response later in 2020 and in early 2021 as being particularly wrong. By that time we already knew the virus pretty well even if we were at times surprised by the rise of variants of concern. The recommendations to protect borders and to lock down early were clear and the public was still willing to accept the measures. The vaccines were being tested and showing some promise.

Yet, the government decided not to implement the lockdown and decided to allow international travel, made a hash of testing, and failed to protect care homes again. We are still paying the price.